SDA (SDA flex)  7.2
Simulation of Diffusional Association
change_conformation Member List

This is the complete list of members for change_conformation, including all inherited members.

acceptchange_conformation
accepted_new_confchange_conformation
array_energychange_conformation
array_energy_1dchange_conformation
array_energy_sda2protchange_conformation
array_energy_sda2prot_1dchange_conformation
array_energy_sdammchange_conformation
bool_escapechange_conformation
change_conformation(prot, tab_prot, geom, param_force_energy, param_metal, type_calc, dummy_array, hit, accepted, nb_overlap_flex, ptrf_energy)change_conformation
change_conformation(prot, tab_prot, geom, param_force_energy, param_metal, type_calc, dummy_array, hit, accepted, nb_overlap_flex, ptrf_energy)change_conformation
change_conformation(prot, tab_prot, geom, param_force_energy, param_metal, type_calc, dummy_array, hit, accepted, nb_overlap_flex, ptrf_energy)change_conformation
check_reaction_pair(prot1, prot2, rcriteria, visited_windows, escape, sum_time, first_time, time, dtnow, close)change_conformation
check_reaction_pair(prot1, prot2, rcriteria, visited_windows, escape, sum_time, first_time, time, dtnow, close)change_conformation
check_reaction_pair_sdamm(tab_protein, set1, set2, rcriteria, geom, sum_time, dtnow, array_close, nclose, close)change_conformation
clos1change_conformation
compute_rdf(resid_time, tab_protein, geom)change_conformation
convert_to_record_format(array_energy, array_energy_1d, max_bit_energy)change_conformation
correct_format_energychange_conformation
current_confchange_conformation
current_occurchange_conformation
current_runchange_conformation
current_run_checkchange_conformation
current_stepchange_conformation
cut2change_conformation
distchange_conformation
dmchange_conformation
dm30change_conformation
dtchange_conformation
dtnowchange_conformation
dummy_arraychange_conformation
dummy_array_proteinchange_conformation
fchange_conformation
f_imgchange_conformation
forcechange_conformation
geomchange_conformation
global_steps_recordchange_conformation
half_boxchange_conformation
hitchange_conformation
ichange_conformation
ierrchange_conformation
iflexchange_conformation
init_time(param_timestep, geom, dist, rhit, dm30, dtnow, hit)change_conformation
init_time(param_timestep, geom, dist, rhit, dm30, dtnow, hit)change_conformation
io_errchange_conformation
io_errorchange_conformation
jchange_conformation
kchange_conformation
local_escapechange_conformation
local_fptchange_conformation
local_sumtimechange_conformation
local_visited_windowschange_conformation
make_bd_move_2prot(prot1, prot2, geom, force, torque, torque1, dtnow, dist, rhit, hit, accept, escape, total_overlap, ignore_excl, iimg_hydro, old_rotation, surface_height)change_conformation
make_bd_move_sdamm(tab_prot, geom, nb_prot, force, torque, dt, iimg_hydro, old_rotation, surface_height)change_conformation
max_energy_termschange_conformation
mrotchange_conformation
n_rdfschange_conformation
n_repeat_occurchange_conformation
nb_overlapchange_conformation
nb_overlap_flexchange_conformation
nb_prot1change_conformation
nb_prot2change_conformation
nb_proteinchange_conformation
nboost_allchange_conformation
nmax_overlapchange_conformation
nrunchange_conformation
nstep_allchange_conformation
o_complexeschange_conformation
o_complexeschange_conformation
old_rotationchange_conformation
option_ompchange_conformation
overlapchange_conformation
p_local_complexechange_conformation
p_restartchange_conformation
p_tmp_onecomplexechange_conformation
param_analyticchange_conformation
param_force_energychange_conformation
param_metaldesolvchange_conformation
param_probechange_conformation
param_timestepchange_conformation
pos_relatchange_conformation
print_stepchange_conformation
print_step_complchange_conformation
print_step_trajchange_conformation
protein1change_conformation
protein2change_conformation
ptab_proteinchange_conformation
rboostchange_conformation
rcrit_metchange_conformation
rcriteriachange_conformation
resid_timechange_conformation
rhitchange_conformation
run_donechange_conformation
size_array_energychange_conformation
size_array_energy_sda2protchange_conformation
size_array_energy_sda2prot_1dchange_conformation
statuschange_conformation
steps_recordchange_conformation
steps_strchange_conformation
tchange_conformation
t1change_conformation
tab_proteinchange_conformation
tab_proteinchange_conformation
tab_protein_uniquechange_conformation
timechange_conformation
time_allchange_conformation
time_per_runchange_conformation
timehitchange_conformation
timemaxchange_conformation
timer_bdchange_conformation
timer_complexeschange_conformation
timer_energychange_conformation
timer_exchkchange_conformation
timer_flexchange_conformation
timer_forcechange_conformation
timer_rdfchange_conformation
timer_reactpairchange_conformation
timer_recordchange_conformation
timer_update_ratechange_conformation
torquechange_conformation
total_accepted_new_confchange_conformation
total_energychange_conformation
total_occurchange_conformation
total_overlapchange_conformation
total_overlap_flexchange_conformation
total_test_change_conformationchange_conformation
trajectorieschange_conformation
trajectorieschange_conformation
type_calcchange_conformation
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