SDA (SDA flex)  7.2
Simulation of Diffusional Association
Data Types | Modules | Functions/Subroutines
mod_array_protein.f90 File Reference

Define an array where all proteins are stored. More...

Data Types

type  mod_array_protein::array_protein_type
 Main class which owns all subgroups : protein and sogrid, see UMLshema_archi. More...
 

Modules

module  mod_array_protein
 Module to define an array of proteins.
 

Functions/Subroutines

subroutine mod_array_protein::new_array_protein (this, size, nb_grids)
 Allocate the arrays. More...
 
subroutine mod_array_protein::delete_array_protein (this, opt_copy_omp)
 Deallocate arrays array and set_of_protein. More...
 
subroutine mod_array_protein::copy_array_protein (this, ptab_dest, type_calc, param_metaldesolv)
 Make a copy of the array. More...
 
integer function mod_array_protein::get_type (this, prot_nb)
 Function to get the protein type. More...
 
subroutine mod_array_protein::print_info_array_protein (this, opt_check_associated)
 Print array information. More...
 

Detailed Description

Define an array where all proteins are stored.

Version
{version 7.2.3 (2019)}

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References: see also http://mcm.h-its.org/sda7/do:c/doc_sda7/references.html:

Brownian dynamics simulation of protein-protein diffusional encounter. (1998) Methods, 14, 329-341.

SDA 7: A modular and parallel implementation of the simulation of diffusional association software. Journal of computational chemistry 36.21 (2015): 1631-1645.

Authors: M.Martinez, N.J.Bruce, J.Romanowska, D.B.Kokh, P.Mereghetti, X. Yu, M. Ozboyaci, M. Reinhardt, P. Friedrich, R.R.Gabdoulline, S.Richter and R.C.Wade


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