Define an array where all proteins are stored. More...
Data Types | |
type | mod_array_protein::array_protein_type |
Main class which owns all subgroups : protein and sogrid, see UMLshema_archi. More... | |
Modules | |
module | mod_array_protein |
Module to define an array of proteins. | |
Functions/Subroutines | |
subroutine | mod_array_protein::new_array_protein (this, size, nb_grids) |
Allocate the arrays. | |
subroutine | mod_array_protein::delete_array_protein (this, opt_copy_omp) |
Deallocate arrays array and set_of_protein. | |
subroutine | mod_array_protein::copy_array_protein (this, ptab_dest, type_calc, param_metaldesolv) |
Make a copy of the array. | |
integer function | mod_array_protein::get_type (this, prot_nb) |
Function to get the protein type. | |
subroutine | mod_array_protein::print_info_array_protein (this, opt_check_associated) |
Print array information. | |
Define an array where all proteins are stored.
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References: see also http://mcm.h-its.org/sda7/do:c/doc_sda7/references.html:
Brownian dynamics simulation of protein-protein diffusional encounter. (1998) Methods, 14, 329-341.
SDA 7: A modular and parallel implementation of the simulation of diffusional association software. Journal of computational chemistry 36.21 (2015): 1631-1645.
Authors: M.Martinez, N.J.Bruce, J.Romanowska, D.B.Kokh, P.Mereghetti, X. Yu, M. Ozboyaci, M. Reinhardt, P. Friedrich, R.R.Gabdoulline, S.Richter and R.C.Wade