SDA (SDA flex)
7.2
Simulation of Diffusional Association
Loading...
Searching...
No Matches
Here is a list of all namespace variables with links to the namespace documentation for each variable:
- a -
accessibility :
mod_gridtype
account_occurency :
setup_sda
all :
mod_reactioncriteria
assoc_rate :
mod_reactioncriteria
- b -
beta :
mod_gouy_chapman
- c -
c :
mod_gouy_chapman
,
mod_rate_constant_calculation_quadpack
c1g2 :
mod_force_energy
c2g1 :
mod_force_energy
charge :
mod_gridtype
charge_square :
mod_gridtype
complexe_enum :
mod_record
- d -
de0 :
par_zig_mod
debyeh :
mod_gridtype
default_name :
mod_van
default_resid :
mod_van
default_vdw :
mod_van
desolv :
mod_gridtype
dn0 :
par_zig_mod
docking :
mod_reactioncriteria
dp :
par_zig_mod
- e -
e_q :
com_sda
elec_transfer :
mod_reactioncriteria
electro :
mod_gridtype
ener_colnames :
mod_record
enum_analytic_types :
mod_gridtype
enum_box :
mod_geometry
enum_dtgrid :
mod_grid
enum_grid_force_calc :
mod_gridtype
enum_grid_types :
mod_gridtype
enum_nambox :
mod_geometry
enum_sphere :
mod_geometry
enum_uhbd :
mod_grid
epsi_o :
com_sda
epsilon_0 :
mod_gouy_chapman
epsilon_r :
mod_gouy_chapman
epssol :
com_sda
exclusion :
mod_gridtype
exit_prog :
com_sda
- f -
first :
mod_record
flex_first :
mod_flexibility
flex_intern :
mod_flexibility
flex_last :
mod_flexibility
flex_metropolis :
mod_flexibility
flex_minimum :
mod_flexibility
flex_random :
mod_flexibility
flex_time :
mod_flexibility
- g -
geom :
setup_sda
- h -
half :
par_zig_mod
hydrophob :
mod_gridtype
- i -
image_charge :
mod_gridtype
inputf :
com_sda
intern :
mod_record
io6 :
com_sda
io_boot_fpt :
com_sda
io_bootstrp :
com_sda
io_ext_file :
mod_van
io_rdf :
com_sda
io_restart :
com_sda
io_startend :
com_sda
io_steps :
com_sda
iocmx :
com_sda
iocmxn :
com_sda
iocmxp :
com_sda
iopmf :
com_sda
iopoti :
com_sda
iurxna :
com_sda
- k -
k :
mod_gouy_chapman
kappa :
mod_rate_constant_calculation_quadpack
kcnst :
com_sda
- l -
last :
mod_record
last_version_rec :
mod_record
lennardjones :
mod_gridtype
list_surfatom :
mod_gridtype
- m -
m1 :
par_zig_mod
m2 :
par_zig_mod
max_nb_integer_bit :
com_sda
max_nb_real_bit :
com_sda
maxconf :
mod_sda_input
maxgrid :
mod_sda_input
metal_desolv :
mod_gridtype
- n -
n_a :
mod_gouy_chapman
navo :
com_sda
nb_default_tcharge :
mod_van
nb_default_vdw :
mod_van
nmax_overlap :
setup_sda
nrun :
setup_sda
- o -
o_complexes :
setup_sda
off_rc :
mod_reactioncriteria
off_record :
mod_record
option_omp :
setup_sda
other :
mod_gridtype
- p -
p_restart :
setup_sda
par_fe :
par_zig_mod
par_fn :
par_zig_mod
par_jsr :
par_zig_mod
par_ke :
par_zig_mod
par_kn :
par_zig_mod
par_n :
par_zig_mod
par_step :
par_zig_mod
par_we :
par_zig_mod
par_wn :
par_zig_mod
param_analytic :
setup_sda
param_force_energy :
setup_sda
param_metaldesolv :
setup_sda
param_pmf :
setup_sda
param_probe :
setup_sda
param_timestep :
setup_sda
pi :
com_sda
- r -
rboost :
setup_sda
rcnst :
com_sda
rcnstj :
com_sda
rcriteria :
setup_sda
repulsive_lj :
mod_gridtype
resid_time :
setup_sda
rt_distance :
mod_residencetime
rt_off :
mod_residencetime
rt_plan :
mod_residencetime
rt_resid3d :
mod_residencetime
- s -
sda_2proteins :
mod_type_calc
sda_energy :
mod_type_calc
sda_koff :
mod_type_calc
sda_pmf :
mod_type_calc
sdamm :
mod_type_calc
symetric :
mod_force_energy
- t -
tab_protein_unique :
setup_sda
te0 :
par_zig_mod
temper :
com_sda
temperature :
mod_gouy_chapman
timemax :
setup_sda
tn0 :
par_zig_mod
trajectories :
setup_sda
trajectory_enum :
mod_record
type_calc :
setup_sda
- v -
var_colnames :
mod_record
ve :
par_zig_mod
vn :
par_zig_mod
Generated on Mon Feb 17 2025 15:28:58 for SDA (SDA flex) by
1.9.8
Imprint/Privacy