mod_flexibility::list_flex_type Type Reference

List of set of grid. More...

Collaboration diagram for mod_flexibility::list_flex_type:

Public Attributes
character(128)	list_conf_fname
	in case of dynamical allocation keep copy of list_name_conf and factor grid, may change More...
real(kind=8)	distance_max
	store the maximum over all sogrid More...
logical	implicit
	related to the format of list_conformation.dat should belong to the module, because of reload More...
integer	max_size_movable_charge
	need to know the maximum size to not reallocate every time should be allocated when reading input, More...
integer	max_size_movable_atom
type(nodeflex), pointer	p_first
	pointer on first and last node of the list More...
type(nodeflex), pointer	p_last
real(kind=4)	frequence
	keep all data for update, minimal in term of memory all same type of proteins have the same frequency because sdamm=> asynchroneous update, add own time_frequence to flexible ( each protein ) and use std_freq_random More...
real(kind=4)	std_freq_random
integer	method_flex
	to deal with the different methods of update, add option for nearest_neighbour More...
logical	nearest_ngb
integer	total_conf
	for setting total number of conformation and the initial nb at the start of the trajectory More...
integer	initial_conf

Detailed Description

List of set of grid.

Each group of proteins will point indirectly, by a flexible, to one unique list

Member Data Documentation

distance_max

real ( kind=8 ) mod_flexibility::list_flex_type::distance_max

store the maximum over all sogrid

frequence

real ( kind=4 ) mod_flexibility::list_flex_type::frequence

keep all data for update, minimal in term of memory all same type of proteins have the same frequency because sdamm=> asynchroneous update, add own time_frequence to flexible ( each protein ) and use std_freq_random

implicit

logical mod_flexibility::list_flex_type::implicit

related to the format of list_conformation.dat should belong to the module, because of reload

initial_conf

integer mod_flexibility::list_flex_type::initial_conf

list_conf_fname

character ( 128 ) mod_flexibility::list_flex_type::list_conf_fname

in case of dynamical allocation keep copy of list_name_conf and factor grid, may change

max_size_movable_atom

integer mod_flexibility::list_flex_type::max_size_movable_atom

max_size_movable_charge

integer mod_flexibility::list_flex_type::max_size_movable_charge

need to know the maximum size to not reallocate every time should be allocated when reading input,

Todo:

need to add max_atom_lj or already included ? to check

method_flex

integer mod_flexibility::list_flex_type::method_flex

to deal with the different methods of update, add option for nearest_neighbour

nearest_ngb

logical mod_flexibility::list_flex_type::nearest_ngb

p_first

type ( nodeflex ), pointer mod_flexibility::list_flex_type::p_first

pointer on first and last node of the list

p_last

type ( nodeflex ), pointer mod_flexibility::list_flex_type::p_last

std_freq_random

real ( kind=4 ) mod_flexibility::list_flex_type::std_freq_random

total_conf

integer mod_flexibility::list_flex_type::total_conf

for setting total number of conformation and the initial nb at the start of the trajectory

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The documentation for this type was generated from the following file:

• mod_flexibility.f90