====== PlayGround ======

==== Latex Plugin ====
Components

Name:
    LaTeX plugin administration 
Type:
    admin

Name:
    $$...$$ syntax  for displayed LaTeX-math [ddollar]
Type:
    syntax

Name:
    \begin{displaymath} ... \end{displaymath} syntax [displaymath]
Type:
    syntax

Name:
    $...$ syntax for inline LaTeX-math [dollar]
Type:
    syntax

Name:
    \begin{eqnarray} ... \end{eqnarray} syntax [eqnarray]
Type:
    syntax

Name:
    \begin{eqnarray*} ... \end{eqnarray*} syntax [eqnarraystar]
Type:
    syntax

Name:
    \begin{equation} ... \end{equation} syntax [equation]
Type:
    syntax

Name:
    \begin{equation*} ... \end{equation*} syntax [equationstar]
Type:
    syntax

Name:
    <latex>...</latex> syntax for inline LaTeX (non-math-mode) [latex]
Type:
    syntax

Examples:
$$a&=&\frac{a}{c}\times b\times a$$ another way to say $c=b$ $a\times u\times b$ 

==== Google Charts ====

<gchart 350x120 pie3d #0000ff #ffffff left legend "Favorite fruits">
Apples       = 33
Peaches      = 23
Strawberries = 25
Peanuts      = 7
</gchart>



==== Graphviz plugin ====
Graphviz example, using [[http://en.wikipedia.org/wiki/DOT_language|dot syntax]]
<graphviz>
digraph {
A->B;
B->C;
A->C;
}
</graphviz><graphviz>
graph MCM {
     // The label attribute can be used to change the label of a node
     a [label="Foo"];
     // Here, the node shape is changed.
     b [shape=box];
     // These edges both have different line properties
     a -- b -- c [color=blue];
     b -- d [style=dotted];
 }
</graphviz>
<code><graphviz>
digraph {
A->B;
B->C;
A->C;
}
</graphviz><graphviz>
graph MCM {
     // The label attribute can be used to change the label of a node
     a [label="Foo"];
     // Here, the node shape is changed.
     b [shape=box];
     // These edges both have different line properties
     a -- b -- c [color=blue];
     b -- d [style=dotted];
 }
</graphviz>
</code>

==== JMOL plugin ====
Syntax see [[http://wiki.symplus.com/en/jmol_plugin]]. Jmol script can be used.

Link to pdb file {{:pdb:1pem.pdb.gz|PDB file for Ribonucleotide Reductase}}
<jmol {{:pdb:1pem.pdb.gz}}>
   jmolBr();
   jmolRadioGroup([
       "spacefill off",
       "spacefill 20%",
	["spacefill 95%", null, "checked"]
       ], "<br />");
   jmolBr();   
</jmol>
<code><jmol {{:pdb:1pem.pdb.gz}}></code>

==== Pubchem plugin example ====
[[http://wiki.symplus.com/en/pubchem_plugin]]
=== Link ===
{{pubchem>link:6248}}<code>{{pubchem>link:6248}}</code>
=== Image large ====
{{pubchem>large:6248}}<code>{{pubchem>large:6248}}</code>
=== Image small ====
{{pubchem>small:6248}}<code>{{pubchem>small:6248}}</code>

=== Pubchem formula ===
{{pubchem>formula:6248}}<code>{{pubchem>formula:6248}}</code>
=== Pubchem IUPAC ===
{{pubchem>IUPAC:6248}}<code>{{pubchem>IUPAC:6248}}</code>

==== PDB plugin ====
=== Show small image ===
[[http://wiki.symplus.com/en:PDB%20plugin]]
{{pdb>small:1WLA}}<code>{{pdb>small:1WLA}}</code>
=== Show pdb link with information ===
{{pdb>long:1WLA}}<code>{{pdb>long:1WLA}}</code>

==== Uniprot plugin example ====
{{uniprot>name:LACTB_HUMAN}} or {{uniprot>pac:P83111}}
<code>{{uniprot>name:LACTB_HUMAN}} or or {{uniprot>pac:P83111}}</code>

==== Timeline example ====
^Bob  ^
<timeline interval=01/01/2009-31/12/2009 scale=m mark>
highlight=03/07/2009-16/07/2009=bob holiday july
highlight=14/07/2009-22/07/2009:557dcc=Bob sick-list 1
highlight=01/09/2009-14/09/2009
highlight=29/12/2009-30/12/2009
</timeline>

^Joe  ^
<timeline interval=01/05/2009-31/12/2009 scale=w mark>
highlight=19/06/2009-04/07/2009
highlight=14/09/2009-27/09/2009
</timeline>

Where:
    * holidays <timeline interval=01/01/2009-10/01/2009>highlight=01/01/2009-10/01/2009</timeline>
    * sickness <timeline interval=01/01/2009-10/01/2009>highlight=01/01/2009-10/01/2009:557dcc</timeline>
<code>
^Bob  ^
<timeline interval=01/01/2009-31/12/2009 scale=m mark>
highlight=03/07/2009-16/07/2009=bob holiday july
highlight=14/07/2009-22/07/2009:557dcc=Bob sick-list 1
highlight=01/09/2009-14/09/2009
highlight=29/12/2009-30/12/2009
</timeline>

</code>

==== Pubmed example ====
=== Pubmed short ===
{{pubmed>short:9039911}}
<code>{{pubmed>short:9039911}}</code>
=== Pubmed long ===
{{pubmed>long:9039911}}
<code>{{pubmed>long:9039911}}</code>
=== Pubmed veryshort ===
[[pubmed>9039911]]
<code>[[pubmed>9039911]]</code>
=== Pubmed summary (XML) ===
{{pubmed>summaryXML:9039911}}
<code>{{pubmed>summaryXML:9039911}}</code>

==== Webthumb plugin ====
<webthumb:http://www.amazon.com|http://www.amazon.com>
<code><webthumb:http://www.amazon.com|http://www.amazon.com></code>
<webthumb:http://www.h-its.org|http://www.h-its.org> 
<code><webthumb:http://www.h-its.org|http://www.h-its.org></code>

==== Media manager ====

<code>{{media}}</code>

==== Sortable Tables ====
<sortable>
^Col1^Col3^Col3^
|1|one|25/12/2008|
|2|two|10/12/2008|
</sortable>
https://www.dokuwiki.org/plugin:sortablejs

<sortable 2>
^Column 1^Column 2^Column 3^
|1|Row one|first| 
|2|Row two|second| 
|3|Row three|third| 
</sortable> 

See more at: http://docs.oseems.com/general/web/dokuwiki/sort-table#sthash.y7WrsHTE.dpuf


<sortable>
^Col1^Col3^Col3^
|1|one|25/12/2008|
|2|two|10/12/2008|
</sortable>