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Failed to load plugin pubchem
Error: Class "DokuHTTPClient" not found
More info is available in the error log.
Failed to load plugin pubmed
Error: Class "DokuHTTPClient" not found
More info is available in the error log.

Level 1 Headline

Google Charts

<gchart 350×120 pie3d #0000ff #ffffff left legend “Favorite fruits”> Apples = 33 Peaches = 23 Strawberries = 25 Peanuts = 7 </gchart>

Graphviz plugin

Graphviz example, using dot syntax

<graphviz>
digraph {
A->B;
B->C;
A->C;
}
</graphviz><graphviz>
graph MCM {
     // The label attribute can be used to change the label of a node
     a [label="Foo"];
     // Here, the node shape is changed.
     b [shape=box];
     // These edges both have different line properties
     a -- b -- c [color=blue];
     b -- d [style=dotted];
 }
</graphviz>

JMOL plugin

Syntax see http://wiki.symplus.com/en/jmol_plugin. Jmol script can be used.

Link to pdb file PDB file for Ribonucleotide Reductase <jmol 1pem.pdb.gz>

 jmolBr();
 jmolRadioGroup([
     "spacefill off",
     "spacefill 20%",
["spacefill 95%", null, "checked"]
     ], "<br />");
 jmolBr();   

</jmol>

<jmol {{:pdb:1pem.pdb.gz}}>

Pubchem plugin example

link:6248

{{pubchem>link:6248}}

Image large

large:6248

{{pubchem>large:6248}}

Image small

small:6248

{{pubchem>small:6248}}

Pubchem formula

formula:6248

{{pubchem>formula:6248}}

Pubchem IUPAC

IUPAC:6248

{{pubchem>IUPAC:6248}}

PDB plugin

Show small image

http://wiki.symplus.com/en:PDB%20plugin small:1WLA

{{pdb>small:1WLA}}

long:1WLA

{{pdb>long:1WLA}}

Uniprot plugin example

name:LACTB_HUMAN or pac:P83111

{{uniprot>name:LACTB_HUMAN}} or or {{uniprot>pac:P83111}}

Timeline example

Bob

<timeline interval=01/01/2009-31/12/2009 scale=m mark> highlight=03/07/2009-16/07/2009=bob holiday july highlight=14/07/2009-22/07/2009:557dcc=Bob sick-list 1 highlight=01/09/2009-14/09/2009 highlight=29/12/2009-30/12/2009 </timeline>

Joe

<timeline interval=01/05/2009-31/12/2009 scale=w mark> highlight=19/06/2009-04/07/2009 highlight=14/09/2009-27/09/2009 </timeline>

Where:

  • holidays <timeline interval=01/01/2009-10/01/2009>highlight=01/01/2009-10/01/2009</timeline>
  • sickness <timeline interval=01/01/2009-10/01/2009>highlight=01/01/2009-10/01/2009:557dcc</timeline>
^Bob  ^
<timeline interval=01/01/2009-31/12/2009 scale=m mark>
highlight=03/07/2009-16/07/2009=bob holiday july
highlight=14/07/2009-22/07/2009:557dcc=Bob sick-list 1
highlight=01/09/2009-14/09/2009
highlight=29/12/2009-30/12/2009
</timeline>

Pubmed example

Pubmed short

short:9039911

{{pubmed>short:9039911}}

Pubmed long

long:9039911

{{pubmed>long:9039911}}

Pubmed veryshort

9039911

[[pubmed>9039911]]

Pubmed summary (XML)

summaryXML:9039911

{{pubmed>summaryXML:9039911}}

Webthumb plugin

<webthumb:http://www.amazon.com|http://www.amazon.com>

<webthumb:http://www.amazon.com|http://www.amazon.com>

<webthumb:http://www.h-its.org|http://www.h-its.org>

<webthumb:http://www.h-its.org|http://www.h-its.org>

Media manager

{{media}}
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