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projects:data [2018/03/12 13:43]
richter [MCM supplemental data]
projects:data [2020/06/10 16:18] (current)
wade [MCM supplemental data]
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-  *  [[http://​onlinelibrary.wiley.com/​doi/​10.1002/​prot.25167/​abstract|Rudi Tong, Rebecca C. Wade and Neil J. Bruce (2016), Proteins: Struct. Func. Bioinf., 84, 1844-1858. DOI: 10.1002/​prot.25167]]+  *  [[http://​onlinelibrary.wiley.com/​doi/​10.1002/​prot.25167/​abstract|Comparative electrostatic analysis of adenylyl cyclase for isoform dependent regulation properties.]] ​Rudi Tong, Rebecca C. Wade and Neil J. Bruce (2016), Proteins: Struct. Func. Bioinf., 84, 1844-1858. DOI: 10.1002/​prot.25167 
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 +^  Structures ​  ​^ ​   Grids    ^ 
 +|{{ :​projects:​modelledisoformstructuresnorefine.tgz |Unrefined modelled AC isoforms for small molecule analysis}} |{{ :​projects:​electrostaticgridsnorefine.tgz |Electrostatic potential grids from unrefined structures, UHBD format}} | 
 +|{{ :​projects:​modelledisoformstructures.tgz |Modelled AC isoforms}} ​ |{{ :​projects:​electrostaticgrids.tgz |Electrostatic potential grids, UHBD format}} |
  
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   * [[http://​pubs.rsc.org/​en/​Content/​ArticleLanding/​2016/​CP/​C6CP0020 | Three steps to gold: mechanism of protein adsorption revealed by Brownian and molecular dynamics simulations]], ​ Ozboyaci M, Kokh DB, Wade, RC, Phys. Chem. Chem. Phys. (2016) 18:​10191-10200. doi: 10.1039/​C6CP00201C : {{:​projects:​blip-au_2orientations_perspective.zip| Movie showing adsorption of beta-lactamase inhibitor protein (BLIP) onto an Au(111) surface in molecular dynamics simulations starting from two encounter complexes generated by Brownian dynamics simulation. (zipped (zip) file)}}.   * [[http://​pubs.rsc.org/​en/​Content/​ArticleLanding/​2016/​CP/​C6CP0020 | Three steps to gold: mechanism of protein adsorption revealed by Brownian and molecular dynamics simulations]], ​ Ozboyaci M, Kokh DB, Wade, RC, Phys. Chem. Chem. Phys. (2016) 18:​10191-10200. doi: 10.1039/​C6CP00201C : {{:​projects:​blip-au_2orientations_perspective.zip| Movie showing adsorption of beta-lactamase inhibitor protein (BLIP) onto an Au(111) surface in molecular dynamics simulations starting from two encounter complexes generated by Brownian dynamics simulation. (zipped (zip) file)}}.
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 +  * [[https://​doi.org/​10.1002/​1873-3468.13808 | Structural characterization of an Arf dimer interface: molecular mechanism of Arf‐dependent membrane scission ]], Diestelkoetter‐Bachert P, Beck R, Reckmann I, Hellwig A, Garcia‐Saez A, Zelman‐Hopf M, Hanke A, Alves AN, Wade RC, Mayer MP, Wieland F  FEBS Lett,(2020) 1873-3468.13808 doi:​10.1002/​1873-3468.13808 : [[https://​modelarchive.org/​doi/​10.5452/​ma-ww4oz | PDB coordinates of model deposited in ModelArchive]] doi: 10.5452/​ma-ww4oz
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