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projects:software [2019/06/07 10:11] – richter | projects:software [2019/06/07 14:32] – richter | ||
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{{: | {{: | ||
- | ====== MCM software and databases | + | ===== MCM software and databases ===== |
This page has links for webservers and software downloads provided by the Molecular and Cellular Modeling (MCM) group at the Heidelberg Institute for Theoretical Studies (HITS). | This page has links for webservers and software downloads provided by the Molecular and Cellular Modeling (MCM) group at the Heidelberg Institute for Theoretical Studies (HITS). | ||
There are tutorials for some software on our [[tutorials: | There are tutorials for some software on our [[tutorials: | ||
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^ Sycamore | SYstems biology' | ^ Sycamore | SYstems biology' | ||
^ ProSAT+ | Protein structure visualization and \\ annotation tool. \\ Display protein annotations \\ (eg mutation data from uniprot) \\ on protein structures from RCSB. | PDB or Uniprot codes | Webserver | (([[http:// | ^ ProSAT+ | Protein structure visualization and \\ annotation tool. \\ Display protein annotations \\ (eg mutation data from uniprot) \\ on protein structures from RCSB. | PDB or Uniprot codes | Webserver | (([[http:// | ||
- | ^ Molsurfer | Protein structure tool \\ to link a 2D projection of a \\ macromolecular interface to a 3D \\ view of the macromolecular structures \\ [[http:// | + | ^ Molsurfer | Protein structure tool \\ to link a 2D projection of a \\ macromolecular interface to a 3D \\ view of the macromolecular structures \\ [[http:// |
^ KBbox | KBbox: a Toolbox of \\ Computational Methods for Studying \\ the Kinetics of Molecular Binding | Search term | Webserver | | [[https:// | ^ KBbox | KBbox: a Toolbox of \\ Computational Methods for Studying \\ the Kinetics of Molecular Binding | Search term | Webserver | | [[https:// | ||
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: Scripts for pKa calculations with UHBD | : Scripts for pKa calculations with UHBD | ||
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- | ==== References ==== | + | ===== References |